Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800304.1_cds_XP_016469174.1_6135
CDS Infomation

[gene=LOC107791596] [db_xref=GeneID:107791596] [protein=phosphoinositide phospholipase C 2-like isoform X2] [protein_id=XP_016469174.1] [location=join(30097..30414,31461..31657,32589..32724,32798..33028,33129..33361,33848..33965,35088..35240,35338..35424,35644..35937)] [gbkey=CDS]
Sequence

ATGTCGAGACAGACGTACAGAGTCTGTTTCTGTTTCCGGCGGCGGTTCCGGGTAGTCGCC
GCCGAGGCTCCGGCGGATGTAAAGAATTTATTCAATAGATATTCCGATAACGGAGTAATG
AATGCAGAGAACCTACAACGATTCTTAATTGAGGTTCAGAAGGAGGAAAATGCGAGTTTA
GAGGATGCTCAGGGTATTATGAATAATCTTCATGACCTTAAGATCCTTAATATTTTTCAT
CGGAGAGGTCTTCATCTTGACGCATTTTTTAAGTATCTTTTTGCTGATATTAATCCTCCT
ATTAATCCTAAACGCGGGATTCACCATGATATGAATGAGCCTTTGTCTCATTACTTCATA
TACACAGGACATAATTCTTATCTAACTGGGAATCAACTAAGTAGTGATTGCAGTGATGTC
CCCATAATACAAGCCCTGGGCCGAGGTGTACGAGTAATTGAATTGGATATATGGCCAAAT
TCCGCCAAAGATGATGTGGAAGTTCTGCATGGAGGAACATTGACCACTCCGGTTGCGCTC
ATCAAATGTCTGAGGTCTATAAAGGAACATGCTTTTACTGTATCTGAGTATCCTGTTGTG
ATAACACTTGAAGATCATTTAACCCCAGATCTTCAGGCAAAAGTTGCGGAGATGATCACT
CAAACATTTGGAGACATGCTGTTTTCTCCCGATTCATGTTTGAAAGACTTTCCCTCCCCA
GAATCTCTGAAAAAACGTGTTCTGATATCAACTAAGCCACCCAAAGAATACCTTCAGGCG
AAGGAAGTTAAGGAAAAAGACTCGAAGAAAGGAACAGAGTCGCCTGATACAGAAGCTTGG
GGAAGGGAAGTTTCAGACCTTAAAGCCAGATACAATGATAAGGATGATTCTGATGAAGGA
GCAGGTGAGGAAGATGATGAAAGTGACGAAGGAGATCCCAACTCGCAGCAAAATGTCGCA
CCAGAATACAAGCGTTTGATTGCCATTCATGCTGGAAAGGGAAAAGGTGGATTGTCAGAT
TGGCTGAGGGTTGATCCTGATAAAGTAAGACGACTTAGCTTGAGCGAGCAAGAACTTGGA
AAGGCTGTAATTACTCATGGAAAAGAAATTATCAGGTTCACTCAGCGGAACTTGCTCAGA
ATATACCCAAAGGGCATACGTTTCGACTCATCCAATTATAATCCTTTTGTTGCATGGACG
CATGGAGCTCAAATGGTGGCATTCAATATGCAGGGCTATGGAAGATCACTTTGGTTAATG
CATGGTATGTTCAGATCCAATGGTGGTTGTGGATATGTTAAGAAACCAGATATACTATTG
AAAGCAGGTCCTAACAATCAGATCTTCGATCCTGAAGCAAATTTGCCAGTCAAAACTACA
TTGAAGGTGACCGTATTTATGGGGGAAGGATGGTATTATGATTTCAAACACACACACTTT
GATGCATACTCGCCTCCAGATTTCTATGCAAAGATAGGAATTGCCGGAGTTCCGGCTGAT
AATGTAATGAAGAAAACAAAGACACTGGAGGATAATTGGATACCAACTTGGGATGAAAAG
TTTGAGTTCCCATTAACAGTTCCTGAATTGGCTCTACTTCGCGTCGAAGTTCATGAGTAT
GATATGTCTGAAAAAGATGATTTTGCTGGCCAAACTTGTTTACCTGTTTCAGAACTAAGA
CAAGGTATCCGAGCAGTTTCACTCCACGACCGAAAGGGAGAGAAATACAACTCTGTGAAG
CTTCTTATGCGTTTCGAATTTGTCTAA

Peptide Sequence

PEP ID

XP_016469174.1
PEP Infomation

PREDICTED: phosphoinositide phospholipase C 2-like isoform X2 [Nicotiana tabacum]
Sequence

MSRQTYRVCFCFRRRFRVVAAEAPADVKNLFNRYSDNGVMNAENLQRFLIEVQKEENASL
EDAQGIMNNLHDLKILNIFHRRGLHLDAFFKYLFADINPPINPKRGIHHDMNEPLSHYFI
YTGHNSYLTGNQLSSDCSDVPIIQALGRGVRVIELDIWPNSAKDDVEVLHGGTLTTPVAL
IKCLRSIKEHAFTVSEYPVVITLEDHLTPDLQAKVAEMITQTFGDMLFSPDSCLKDFPSP
ESLKKRVLISTKPPKEYLQAKEVKEKDSKKGTESPDTEAWGREVSDLKARYNDKDDSDEG
AGEEDDESDEGDPNSQQNVAPEYKRLIAIHAGKGKGGLSDWLRVDPDKVRRLSLSEQELG
KAVITHGKEIIRFTQRNLLRIYPKGIRFDSSNYNPFVAWTHGAQMVAFNMQGYGRSLWLM
HGMFRSNGGCGYVKKPDILLKAGPNNQIFDPEANLPVKTTLKVTVFMGEGWYYDFKHTHF
DAYSPPDFYAKIGIAGVPADNVMKKTKTLEDNWIPTWDEKFEFPLTVPELALLRVEVHEY
DMSEKDDFAGQTCLPVSELRQGIRAVSLHDRKGEKYNSVKLLMRFEFV

Transcript Sequence

Gene sequence data has not been registered.